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Grid Activities in Singapore 20 February 2006 Grid Activities in Singapore 20 February 2006

National Grid Vision to facilitate the seamless use of an integrated cyber infrastructure in National Grid Vision to facilitate the seamless use of an integrated cyber infrastructure in a secure, effective & efficient manner to advance scientific, engineering & biomedical R&D, with the longer term goal of transforming the Singapore economy using grid

National Grid Steering Committee Chairman MTI (A*STAR, EDB, SPRING, RIs) MINDEF MICA (DSTA, DSO) National Grid Steering Committee Chairman MTI (A*STAR, EDB, SPRING, RIs) MINDEF MICA (DSTA, DSO) MOH (IDA, MDA) (Hospitals) MOE (Schools, NUS, NTU) Industry (Lilly, CPG. ITSC, SITF, …) National Grid Governance Council (NGGC) Working Groups Security Middleware & Architecture Governance & Policy Facilitates & coordinates activities PC Grid Computing Manufacturing Access Grid Digital Media System Administrators Life Sciences SIGs Physical Sciences Network National Grid Operations Centre (NGOC) … Virtual Grid Communities National Grid Office (NGO) National Grid Competency Centre (NGCC)

National Grid Pilot Platform – Phase 1 • Objectives: – Build grid computing awareness National Grid Pilot Platform – Phase 1 • Objectives: – Build grid computing awareness – Foster collaboration – Interconnect main compute resources • Scope: – Establish 1 GE backbone – Establish rudimentary infrastructure for R&D in universities/research centres – Testbed distributed applications Entity OS Platform IHPC AIX IBM Regatta One-North (BII & GIS) Linux Solaris Compaq Alpha Cluster Sun NUS Linux Intel Xeon Cluster NTU Solaris Linux Sun Fire Intel Pentium 4 SMA Linux Itanium 2

Activities • • Formulate the framework & policies Plan & develop a secure platform Activities • • Formulate the framework & policies Plan & develop a secure platform Adopt common open standards Encourage the adoption of Grid Computing • Demonstrate the commercial viability of compute-resource-on-tap • Lay the foundation for a vibrant Grid Computing economy

Physical Sciences Activities Temasek Labs Distributed Simulation of Flow over Dimpled Surfaces Diagnostics & Physical Sciences Activities Temasek Labs Distributed Simulation of Flow over Dimpled Surfaces Diagnostics & Repair Scheduling Skewed Satellite Image Geo-rectification of Satellite Images Distributed Dissipative Particle Dynamics (DPD) Simulation Organized by : Complex Design & Modeling Collaborative Engineering Design & Simulation

Life Sciences Activities • Rationalizing Life Sciences database download, mirroring & maintenance • Hosting Life Sciences Activities • Rationalizing Life Sciences database download, mirroring & maintenance • Hosting of locally generated databases (ala NCBI) • Future Enhancements Organised by – Allow queries across main databases – Support integration of Singapore data – Expand audience to include medical professionals Encyclopedia of Life E-Cell & Gene Simulation Grid. Blast

PC Grid Computing • Stages – – 1: 2: 3: 4: Ideas Competition Selection PC Grid Computing • Stages – – 1: 2: 3: 4: Ideas Competition Selection Development Resource Donation • 3 categories – Schools – Institutes of Higher Learning – Open Sponsored by Joint Organizers with

PC Grid Computing • DSTA’s funding for – Vacation Camp 2005 • 6 & PC Grid Computing • DSTA’s funding for – Vacation Camp 2005 • 6 & 7 December 2005 – Grid-enabling of 2 new applications – 200 United Devices client licenses for schools • In discussion – IDA funding for ICT Clubs in Schools Jointly organized by Supported by

Aero. Genome – Crunching on a PC Grid • Aim: To study bacterial microorganisms Aero. Genome – Crunching on a PC Grid • Aim: To study bacterial microorganisms in the air in Singapore. • Motivation: Air plays significant role in public & environmental health • Initial dataset of 20, 000 DNA sequences were matched against database of 3 million known sequences. Single run on isolated compute resources took an entire month. • Same process took less than 2 days on [email protected] • Future: Scale up study using larger datasets. Courtesy of Dr. Patrick Tan, GIS

Collaborative Engineering • Co-funded collaboration partnership • Industry partners • Benefits • Collaborative Construction Collaborative Engineering • Co-funded collaboration partnership • Industry partners • Benefits • Collaborative Construction Management Initiative • Distributed Collaborative Design & Manufacturing Initiative • Collaborative Engineering Test Bed for Product Realization Initiative – IDA, NUS, Sun Microsystems, APSTC, SES Systems Pte Ltd – Singapore Aerospace Manufacturing, IMAO, ABB Lummus Global, JGC – Help industry to gain early competitive advantage through exploiting engineering collaboration & problem solving capabilities – – Integrated Production Scheduler for Constraints Management Process Parameter Interface Model for Design Management Integrated 4 -D Product Process Model for Constructability Analysis Will use P 2 P for industrial environments – Will provision an Engineering Grid for simulation-based design

Biological Integrated Manufacturing & Services System • Partners • Objective • Platform • Integrates Biological Integrated Manufacturing & Services System • Partners • Objective • Platform • Integrates • Provides • Enables • Reduces – SIMTech, MC 3, NTU, NUS, Novus. Gene, progeniq, Sun Microsystems, Attogenix, Koo. Prime – An integrated platform that allows interoperability between Grid Computing & Bioinstrumentation – That interfaces with bio-databases, bio-informatic tools & manufacturing systems – KOOPlatform, Goal Net, Taverna, Aris & Protégé to facilitate interoperability – A complete pipeline for diagnostic kits design – Robust automation, data acquisition & analysis of bio-instruments – Faster & more cost-efficient techniques for drug development & bio-research – Supply chain costs with integrated resource inventory & logistics planning & scheduling

A*STAR-NGO Call: 2005 Awards SN Project Principal Investigator 1 Grid-based Comparative Genomics Pipeline for A*STAR-NGO Call: 2005 Awards SN Project Principal Investigator 1 Grid-based Comparative Genomics Pipeline for Detecting Conserved Noncoding Functional Regions Jagath C Rajapakse (NTU) 2 Development of a Grid System with Applications to Large-Scale Bio- & Nano-material System Bertil Schmidt (NTU) 3 A Personalized & Adaptive Literature Curation System for the Biomedical Sciences Patrick Tan (NCC) 4 Grid-based PSE for Engineering of Materials Ong Yew Soon (NTU) 5 A Novel Approach to Modeling & Animation with Disk & Ball B-Spline Over the Grid Seah Hock Soon (NTU) 6 Stochastic Super-resolution Imaging: Fundamentals, Algorithms & its Grid Computing Paradigms Ma Kai-Kuang (NTU) 7 Grid-based Scalable & Extensible Large Scale Collaborative Environment Lin Qingping (NTU) 8 Operational Transparent VGC over Service Oriented Grid Robert Gay (NTU) 9 A Semantic based Qo. S Control & Management Framework for Grids Pung Hung Keng (NUS) 10 Design of Resource Management & Large-Scale Data Processing Strategies for Grid Computing Environments Bharadwaj Veeravali (NUS)

Adaptive Enterprise @ Singapore • AE@SG R&D projects – Focus on digital media • Adaptive Enterprise @ Singapore • [email protected] R&D projects – Focus on digital media • User Council (comprising industry participants) to provide requirements & validate work (SMU, HP) – Participation in Large Hadron Collider (LHC) Computational Grid (LCG) WP 6 Grid Economics & Business Models • Global Operation Grid (GOG) WP 1 (NTU, Portal/Media Workbench SIMTech, HP) Cel Animation Grid Enabled Applications Pov. Ray WP 3 (IHPC, NTU, NUS, HP) Information and Job Management Grid Middleware (Globus) Infrastructure GOG NGP P WP 2 (NTU, Temasek Poly, HP) WP 4 … WP 5

Global Operational Grid (GOG) Caltech SDSC ANL NCSA Purdue PSC • Implement baseline grid Global Operational Grid (GOG) Caltech SDSC ANL NCSA Purdue PSC • Implement baseline grid HPC resources • Build partnerships CERN LCG • Industry-relevant IP creation CERN ASCC SINGAPORE GOG Cluster In collaboration with HP Tiramisu Program

Grid Market MC 3 64 Sun Opteron Grid Resource Brokers Grid Resource Providers GOG Grid Market MC 3 64 Sun Opteron Grid Resource Brokers Grid Resource Providers GOG 2 TB Xeon + Itanium 2 72 78 Hardware (CPU, Storage, …) Providers MC 3 dmh Users Application Software Vendors Grid Exchange Sembawang 150 64 CEP Tools JGC SES [email protected] 2 FEMLAB mental ray

Accounting Organisational level consumer-provider business relationship Metering Grid Accounting System (GAS) Bill for organization Accounting Organisational level consumer-provider business relationship Metering Grid Accounting System (GAS) Bill for organization A = ∑ (usage of members of organization A at resources owned by other organizations) $ = f (CPU , memory, license, …) Usage charging Ganglia Monitorin g Collection of raw data Resource Usage … Resource Usage Only stores & reports on information of resource status, no information of users & their jobs Hence, no metering & accounting mechanism [Courtesy of A/Prof. Francis Lee, NTU]

Digital Media Grid POC – Support for animation rendering – Software installed • POV-Ray Digital Media Grid POC – Support for animation rendering – Software installed • POV-Ray • 150 x mental ray licenses – Objective of Trial • For serious users to experience running animation rendering jobs over the grid & understand the state of technology – Users • VHQ Post, Cubic Communications

Enterprise Grid for SMEs • Objectives – Create awareness in SMEs – Provide assistance Enterprise Grid for SMEs • Objectives – Create awareness in SMEs – Provide assistance & guidance to SMEs to harness Grid Computing to exploit internal compute resources • Partners – Mega. Media’s digital media hub (dmh) – TBA

Use of mental ray Licenses • Digital Media companies to use the facilities: • Use of mental ray Licenses • Digital Media companies to use the facilities: • VHQ • Omens-Studio • Enterprise grid @ dmh has been enabled to utilize the licenses • Free access & no charge to commercial users & IHLs

Goal of Proof-of-Concept For users to harness resources on NGPP to run FEMLAB on Goal of Proof-of-Concept For users to harness resources on NGPP to run FEMLAB on a pay-per-use basis resulting in cost-savings for companies, encouraging R&D activities, & improving utilization of resources.

Test-bedding of Provisioning • Objective – To assess viability of a spill-over facility using Test-bedding of Provisioning • Objective – To assess viability of a spill-over facility using GOG clusters – To measure speed of provisioning – To explore appropriate cost model • Outcomes – Accuracy of results is confirmed – License conditions to be re-visited

1 st South East Asia Grid Forum 8 Feb 2006, Singapore • Members • 1 st South East Asia Grid Forum 8 Feb 2006, Singapore • Members • Purpose To provide a forum for national level discussions on setting up grid infrastructures, deploying applications, and facilitating coordination of projects of common interest in South East Asia. Sponsored by:

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